A bifunctional
-xylosidase-xylose isomerase from
Streptomyces sp. EC 10
Najia Belfaquih, Michel J. Penninckx*
Laboratoire de Physiologie et Ecologie Microbienne, Section Interfacultaire d’Agronomie, Universite´ Libre de Bruxelles, c/o Institut Pasteur,
642 rue Engeland, B-1180 Brussels, Belgium
Received 24 June 1999; received in revised form 24 Jan 2000; accepted 15 February 2000
Abstract
-Xylosidase (1,4--D-xylan xylohydrolase EC 3.2.1.37) and xylose isomerase (D-xylose ketol-isomerase EC 5.3.1.5) produced by
Streptomyces sp. strain EC 10, were cell-bound enzymes induced by xylan, straw, and xylose. Enzyme production was subjected to a form
of carbon catabolite repression by glycerol.
-Xylosidase and xylose isomerase copurified strictly, and the preparation was found
homogeneous by gel electrophoresis after successive chromatography on DEAE-Sephacel and gel filtration on Biogel A. Streptomyces sp.
produced apparently a bifunctional
-xylosidase-xylose isomerase enzyme. The molecular weight of the enzyme was measured to be
163,000 by gel filtration and 42,000 by SDS-PAGE, indicating that the enzyme behaved as a tetramer of identical subunits. The
Streptomyces sp.
-xylosidase was a typical glycosidase acting as an exoenzyme on xylooligosaccharides, and working optimally at pH 7.5
and 45°C. The xylose isomerase optimal temperature was 70°C and maximal activity was observed in a broad range pH (5– 8). Enhanced
saccharification of arabinoxylan caused by the addition of the enzyme to endoxylanase suggested a cooperative enzyme action. The first 35
amino acids of the N-terminal sequence of the enzyme showed strong analogies with N-terminal sequences of xylose isomerase produced
by other microorganisms but not with other published N-terminal sequences of
-xylosidases. © 2000 Elsevier Science Inc. All rights
reserved.
1. Introduction
Xylans are major hemicellulose components of lignocel-
lulose biomass [1]. Several enzymes are required for com-
plete hydrolysis and assimilation of xylans, including
-endoxylanase, -xylosidase, and xylose isomerase.
-Xylanase received the broader attention among these en-
zymes [2].
-Xylosidase (1,4--D-xylan xylohydrolase, EC
3.2.1.37) hydrolyzes xylooligosaccharides, is essential for
complete saccharification of xylan, and has been purified
from fungi [3–5] and some bacteria [6 –9].
-Xylosidase
was detected in actinomycetes but deserved little attention,
except in the case of Thermomonospora fusca [10].
Xylose isomerase (D-xylose ketol-isomerase EC 5.3.1.5)
catalyzes the reversible isomerization of D-xylose to D-
xylulose in the first step of xylose metabolism following the
pentose phosphate cycle. It also catalyzes the isomerization
of glucose to fructose. Therefore, it is used industrially in
the production of high fructose syrup under the name glu-
cose isomerase [11]. The enzyme has been isolated from
many microorganisms and has been well studied [12].
Genes from Escherichia coli [13], Bacillus subtilis [14],
Clostridium species [15,16], Streptomyces species [17,18],
Ampullariella species [19] and Actinoplanes missouriensis
[20] have been sequenced.
Actinomycetes are recognized as dominant xylanolytic
species during several processes of biomass transformation
[21], and their enzymes may find new applications in the
pulp and paper industry [22,23] and in the recovery of
fermentable sugars from hemicelluloses [24].
The present paper reports on the regulation of production
and on the characterization of purified Streptomyces sp.
-xylosidase-xylose isomerase enzyme. The strain chosen
for purification was previously selected as an efficient de-
grader of the hemicellulosic fraction of straw [25] and
produces also three typical non-debranching endo-
-xy-
lanases [26]. Present data concluded that
-xylosidase
and xylose isomerase are produced under the form of
a single bifunctional protein enzyme in Streptomyces
sp. EC 10.
* Corresponding author. Tel.:
⫹0032-2-373-3301; fax: ⫹0032-2-373-
3309.
E-Mail address: upemulb@resulb.ulb.ac.be (M.J. Penninckx).
www.elsevier.com/locate/enzmictec
Enzyme and Microbial Technology 27 (2000) 114 –121
0141-0229/00/$ – see front matter © 2000 Elsevier Science Inc. All rights reserved.
PII: S 0 1 4 1 - 0 2 2 9 ( 0 0 ) 0 0 1 8 2 - 4
2. Materials and Methods
2.1. Cultures and media
Streptomyces sp. EC 10 was described in [26].
Before use, the Streptomyces sp. strains were maintained
either frozen at
⫺80°C in 80% (w/v) glycerol or at 4°C as
1-week-old slant cultures on Difco (West Mosley, Surrey,
UK) actinomycetes isolation agar.
Spore suspensions prepared from the slants were resus-
pended in 0.9% NaCl and used for inoculation of the culture
medium. The basal medium without carbon source was
described in [26].
In induction experiments, 20 ml of spores suspension (10
mg dry weight) were first inoculated into 200 ml of the
culture medium containing 0.2% glycerol as the carbon
source. After 48 h of growth, the cells were harvested by
filtration on a Millipore 0.45
m membrane under sterile
conditions, washed with 100 ml of water, and inoculated
into 400 ml of the tested induction medium [27].
For enzyme purification, about 100 mg dry weight of
pregerminated spores of the Streptomyces sp. EC 10 strain,
in 30 ml were inoculated into 1 l of basal culture medium
supplemented with 0.2% (w/v) glycerol, contained in a 3-l
flask, and incubated for 36 h in an orbital shaker (154
strokes. min
⫺1
) at 30°C.
This preculture was added to 7 l of fresh medium in a
15-l Applikon bioreactor (Applitek, Deinze, BE). The cells
were cultivated for 48 h at 100% air saturation and agitation
rate of 250 rpm. After harvesting by sterile centrifugation at
10 420
⫻ g, the pellets were reinoculated into 2 l of basal
medium supplemented with 0.2% oat spelt arabinoxylan
(Sigma, St Louis, Mo, USA). Enzyme induction was per-
formed for 48 h in a 3-l Applikon bioreactor maintained at
100% air saturation and an agitation rate of 250 rpm. The
pellets were harvested by centrifugation and used as an
enzyme source for purification.
2.2. Enzyme purification
The pellets obtained after induction as described above
were resuspended in 40 ml of 10 mM K-phosphate pH 7.0
and sonicated with cooling at 4°C for 15 min with a Vibra
Cell VC 500 ultrasonic processor (Sonics Materials).
The suspension obtained was clarified by centrifugation
at 12 000
⫻ g for 10 min and the supernatant (i.e. cell
lysate) used for further operations.
2.2.1. Anion-exchange chromatography
The cell lysate was layed down on a 2.5
⫻ 45 cm column
packed with DEAE-Sephacel anion exchange resin (Phar-
macia, Belgium), previously equilibrated with 20 mM K-
phosphate buffer, pH 7.0, at 4°C. The column was first
washed with 500 ml of the equilibration buffer and the
proteins were eluted with a linear gradient of 0 –1 M NaCl
in 20 mM K-phosphate buffer, collecting 4-ml fractions.
Active fractions were pooled for further purification, dia-
lyzed overnight, and concentrated to about 5 ml in an
Amicon cell (Amicon, Beverly, MA, USA) using a PM 10
membrane.
2.2.2. Gel filtration
-Xylosidase and xylose isomerase were further chro-
matographed on a Biogel A (Bio-Rad Laboratories) column
(1.5
⫻ 45 cm) previously equilibrated with 50 mM K-
phosphate, pH 7.0. Filtration was done at the rate of 0.4 ml.
min
⫺1
. The active fractions were recovered, ultrafiltered to
about 10 ml as indicated above and kept at
20°C for prolonged storage. All purification steps were
performed at 4°C.
2.3. Enzyme activites and protein assays
2.3.1.
-Xylosidase assay
-Xylosidase assay was based on the release of p-nitro-
phenol from p-nitrophenyl-
-D-xylopyranoside (Sigma).
Appropriately diluted samples were incubated at 45°C with
20 mM substrate in the presence of 50 mM K-phosphate
buffer pH 7.0.
The reaction was stopped by addition of 100 mM NaOH-
glycine pH 10.9, and absorbance of the released p-nitrophe-
nol was immediately measured at 410 nm. Activity units (U)
are
mol p-nitrophenol. min
⫺1
.
2.3.2. Xylose-isomerase assay
The formation of D-xylulose from D-xylose was mea-
sured using the colorimetric assay as described in [28]. A
test mixture of 20
l, containing 0.1 M K-phosphate buffer
pH 7.0, 0.2 M D-xylose, and 0.4 M MnSO
4
, was incubated
together with 20
l of the enzyme solution for 10 min at
50°C. After this period the samples were put on ice to stop
the enzyme reaction and 40
l of 1.5% (w/v) cysteine
hydrochloride in water, 40
l of 0.12% (w/v) carbazole in
ethanol, and 1.2 ml of 70% (v/v) sulfuric acid were added.
After standing for 10 min the absorbance at 540 nm was
determined. The concentration of D-xylulose was deter-
mined from a standard curve of D-xylulose. One unit (U) of
enzyme activity is equal to the formation of one
mol
D-xylulose per min at 50°C.
In induction experiments, the culture medium to be an-
alyzed was first centrifuged as indicated above for enzyme
purification. The pellet was resuspended in 3 ml of 20 mM
K-phosphate pH 7.0 and lysed by sonication as described
above.
-Xylosidase and xylose-isomerase were assayed in
the cell lysate.
2.3.3. Protein
The protein contents were measured by the procedure
of Bradford [29] using BSA Cohn fraction V (Sigma) as
standard.
115
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
2.4. Electrophoresis procedures
PAGE-SDS was carried out with a Bio-Rad apparatus
(Mini Protean II) and a 10 –20% gradient polyacrylamide
gel, using Coomassie Blue staining for detecting protein
bands. Protein markers (Bio-Rad Laboratories) in the
14 000 –97 000 molecular weight range were used for char-
acterization of
-xylosidase-xylose isomerase enzyme.
Analytical isoelectric focusing (IEF) was carried out
using the Phast system and Phast Gel IEF 3–9 (Pharmacia).
2.5. End-product determination
The purified
-xylosidase (5 U 䡠 ml
⫺1
) was incubated
with different xylose oligomers solubilized at 10 mg
䡠 ml
⫺1
in 100 mM K-phosphate buffer pH 7.5, at 40°C. The sam-
ples prelevated during the course of the reaction were ana-
lyzed by HPLC using a Aminex Carbohydrate HPX-87 P
column (Waters Associates-Millipore-Benelux), equili-
brated and eluted with double distilled water. Peaks were
detected and quantified by differential refractometry [26].
2.6. Experiments on cooperative enzyme action
Purified enzyme preparations were assessed for their
contribution to xylan hydrolysis. Oat spelt arabinoxylan (50
mg) was placed in a conical flask with 3 U of purified
xylanases (XI, XII and XIII isoenzymes) and 3 U of
-xy-
losidase. Flasks were also set up with single enzymes as
controls. All the flasks were shaken at 50°C for 2 h and
samples of 250
l were removed at 15-min intervals and
assayed for the release of reducing sugars by the procedure
of Miller [30].
2.7. N-Terminal sequence
Purified
-xylosidase-xylose isomerase separated by
SDS-PAGE was blotted onto a PVDF-Membrane with a
Mini trans-Blot cell (Bio-Rad). The amino terminus was
sequenced with the Applied Biosystems 477 A gas-phase
protein sequencer.
2.8. Reproducibility of results
Only experiments are reported that were repeated at least
twice. Standard deviations were all within 10% of the mean
values presented.
3. Results and Discussion
3.1. Induction and repression pattern of
-xylosidase and
xylose isomerase
In preliminary experiments, it was found that
-xylosi-
dase and xylose isomerase from Streptomyces sp. EC 10
were exclusively associated with the cell pellet obtained
after centrifugation of the different culture medium tested.
This was also previously observed for
-xylosidase in other
Streptomyces sp. strains [28] and Thermomonospora fusca
[31], and in Thermoanaerobacter ethanolicus [32] and other
microorganisms for xylose isomerase.
Both activities were apparently strongly induced by xy-
lan and straw, but not by CMC (Table 1). The enzyme
activity peaked after 2 days of induction and declined there-
after (not illustrated). The decline was associated with a
cellular lysis shown by the fact that a large proportion of
3-day-old and more cells no longer retained the Gram stain.
-Xylosidase and xylose isomerase were also induced by
xylose, the component sugar of xylan. No induction oc-
curred when cells were grown on fructose, glucose or ga-
lactose, or aromatic residues found in lignocellulose
(vanillic and ferulic acids). When glycerol was present in
the media used for the induction experiments (Table 1), the
specific activity of both activities was much lower than in
media not supplemented with glycerol. No activity was
detected when growing the cells with glycerol alone. This
effect is consistent with a form of catabolite repression
mediated by glycerol.
3.2. Enzyme purification and estimation of purity
-Xylosidase and xylose isomerase were found to copu-
rify and eluted from DEAE-Sephacel column in the same
fractions (Fig. 1A). The peak fractions were combined and
subjected to a gel filtration after what the two enzymes
coeluted also in the same fractions (Fig. 1B).
The results of purification are summarized in Table 2.
The overall activity recovery was 15.07% for
-xylosidase
Table 1
-Xylosidase and xylose isomerase induction in Streptomyces sp EC10
and effect of glycerol. Enzyme activities was induced for 48 h with
0.2% substrate in the absence or (where shown) in the presence of 0.2%
glycerol as described in “Materials and methods”. The enzyme activity
was expressed as U.(mg protein)
⫺1
; bacterial protein was determined by
Kjeldahl analysis of total N in the culture solids. Experiments were done
in triplicate; standard deviations were all with 10% of the mean values
presented. ND: not detectable
Carbon sources
-Xylosidase
(U.mg
⫺1
protein)
Xylose isomerase
(U.mg
⫺1
protein)
Birchwood xylan
43.93
8.78
Oat-Spelt xylan
30.06
6.65
Straw
21
5.2
Xylose
16.42
5.2
Xylan
⫹ Glycerol
1.5
0.4
Glycerol
ND
ND
CMC
ND
ND
Fructose
ND
ND
Glucose
ND
ND
Galactose
ND
ND
Vanillic acid
ND
ND
Ferulic acid
ND
ND
116
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
and 15.08% for xylose isomerase. Only one protein band
was confirmed by PAGE (not illustrated) and SDS-PAGE
(Fig. 2). The purified protein migrated also as one band of
pI 4.5 on IEF gel electrophoresis (not illustrated). These
data supported the hypothesis that
-xylosidase and xylose
isomerase activities are produced under the form of a single
bifunctional enzyme.
3.3. Molecular characteristics of
-xylosidase
and xylose isomerase
The pI of the purified
-xylosidase-xylose isomerase was
4.5 as deduced from IEF gel electrophoresis (not illustrat-
ed). The molecular weight of the native bifunctional en-
zyme, measured by gel filtration chromatography, on Biogel
A was 163 000. In the presence of SDS, the native enzyme
dissociated into subunits of 42 000 (Fig. 2), in accordance
with a plausible tetrameric structure. The estimated molec-
ular weight of the Streptomyces sp. native
-xylosidase is
within the range reported for other bacterial enzymes [10,
33,34]. Molecular weights ranging from 26 000 to 250 000
have been reported for fungal
-xylosidases [2], which
Fig. 1. Purification of intracellular xylosidase (‚) and xylose-isomerase (E)
activities from Streptomyces sp. EC 10. (
䡺) protein at 280 nm: A, DEAE-
Sephacel anion exchange chromatography; B, gel filtration chromatography.
Table 2
Summary of purification of
-xylosidase and xylose isomerase from Streptomyces sp. EC10
Purification steps
Crude extract
DEAE-Sephacel
Biogel A
Xylosidase
Xylose-isomerase
Xylosidase
Xylose-isomerase
Xylosidase
Xylose-isomerase
Total activity (U)
8287.5
1683.75
1614
336.75
1249
254
Protein (mg)
272.25
272.25
13.20
13.20
4.06
4.06
Specific activity (U/mg)
30.44
6.18
122.27
25.50
308
62.63
Yield (%)
100
100
19.50
20
15.07
15.08
Purification factor
1
1
4
4.1
10
10.1
Fig. 2. SDS-PAGE (Coomasie-stained) of the
-xylosidase-xylose isomer-
ase from Streptomyces sp. EC 10. Marker proteins, lane 1; purified xylo-
sidase-xylose isomerase, lanes 2 and 3 (7
g protein was applied in Lane
2 and 5
g in Lane 3). Molecular mass of marker proteins in kDa is shown
on the left.
117
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
behaved as monomeric [5], dimeric [35], or tetrameric spe-
cies.
Bacterial
-xylosidases were reported either as an ho-
modimer of subunits having a molecular weight of 65 000 –
70 000 for Bacillus pumilus [36] or an heterotrimer, com-
prising one subunit of 63 000 and two of 85 000 in the case
of Clostridium acetobutylicum [7].
The T. fusca enzyme was assumed to be a trimer of
identical subunits [10]. Clostridium cellulolyticum produced
a
-xylosidase with a molecular weight of 43 000 as deter-
mined by SDS-PAGE electrophoresis [8].
3.4. Catalytic properties of the enzyme
The Streptomyces sp. EC 10
-xylosidase activity
showed a rather sharp pH optimum of 7.5 with practically
no activity below 6.0 and above 9.0 (Fig. 3A). It was also
found that this activity was stable at room temperature for at
least 48 h in the 5.0 to 8.0 pH range (Fig. 3A). Temperature
optimum was 45°C (Fig. 4A), the enzyme retaining only
20% of activity at 55°C. The enzyme retained 75% of its
activity when incubated at 45°C for 2 h, but only about 30%
survived at 60°C (Fig. 4A). The enzyme K
m
for pNPX was
calculated by using the substrate at concentration of 1 to 20
mM at 45°C and pH 7.5. Under these conditions, the en-
zyme obeyed strict Michaelian conditions with R
2
values of
more than 0.998 in Lineweaver-Burke double reciprocal
plots (not illustrated). The apparent K
m
of the purified
-xy-
losidase for pNPX was 13.5 mM (SD 0.01; N
⫽ 3).
The Streptomyces sp. EC10
-xylosidase exhibited com-
parable thermostability to other fungal and bacterial
-xy-
losidases but lower than the enzyme produced by the ther-
mophilic actinomycete T. fusca [10]. The T. fusca enzyme
exhibited also activity across a relatively broad pH range
(5.0 to 9.0), which was not the case for the Streptomyces sp.
and Bacillus pumilus [6]
-xylosidases, characterized by a
sharper pH optimum.
The T. fusca enzyme showed a higher affinity for the
pNPX substrate than the Streptomyces sp. EC10 enzyme,
with an apparent K
m
value of 0.89 mM [10].
The xylose isomerase activity showed maximum activity
at pH 7.0 and retained a high percentage of activity over a
wide pH range (Fig. 3B). It has also an optimum tempera-
ture at 70°C, is stable between 30 and 70°C and conserved
70% of its activity when incubated at 70°C during one hour
(Fig. 4B).
The size of Streptomyces sp. EC 10 purified protein is in
the range reported for the few bacterial
-xylosidases de-
scribed, but the acidic nature of the protein has more in
common with some of the monomeric
-xylosidases de-
scribed in fungi.
The purified enzyme hydrolyzed pNPX and had no de-
tectable endo-xylanase,
␣-arabinofuranosidase, endoglu-
canase or
-glucosidase activities, even after overnight in-
cubation.
Liberation of xylose (X) from xylobiose (X
2
) (Fig. 5A)
and xylotriose (X
3
) (Fig. 5B) was detected. Xylobiose ac-
cumulated transiently during xylotriose hydrolysis. This
identifies the
-xylosidase produced by Streptomyces sp.
EC 10 as a typical glycosidase which split xylobiose and
acted as an exoenzyme on xylotriose and presumably on
longer xylodextrins.
3.5. Synergy experiments
Purified
-xylosidase alone, exhibited a very limited
saccharifying activity on arabinoxylan, but enhanced sig-
nificatively the action of endoxylanases of the Streptomyces
Fig. 3. Effect of pH on stability (F) and activity (Œ) of purified
-
xylosidase and xylose isomerase. The pH stability was measured from the
residual activity after incubation in the buffers with indicated pHs at room
temperature for 2 h. The effect of pH on activity was examined after
incubation of the
-xylosidase with pNPX in the buffers with indicated
pHs at 45°C for 10 min and the xylose isomerase activity was examined
after incubation of xylose isomerase with xylose in buffers with indicated
pHs at 50°C for 10 min. A,
-xylosidase; B, xylose isomerase.
118
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
sp. EC 10 strain, above the theoretical additive effect (Fig.
6). This observation agreed with a role for
-xylosidase in
hydrolyzing short oligosaccharides inhibitory to endoxyla-
nase activity.
Synergy between enzyme components has been exten-
sively studied for fungal cellulases [37], but few reports
have appeared concerning xylanolytic enzymes. Biely and
coworkers suggested a synergy between fungal acetyl es-
terase and endo-
-xylanases [38]. Bachmann and McCarthy
[31] reported some cooperative action between xylanolytic
components of T. fusca. A much clearer understanding of
synergy between xylanolytic enzymes has still to emerge,
and will probably appear considerably more elaborate than
in the case of cellulases due to the more complex nature of
xylan substrate as compared to cellulose.
3.6. N-Terminal sequence
The amino-terminal amino acid sequence of the purified
enzyme was determined and only one sequence was ob-
served:
Fig. 4. A, effect of temperature on stability (F) and activity (Œ) of purified
-xylosidase. For stability, the enzyme solution in K- phosphate buffer (50
mM, pH 7.0) was incubated for 1 h at various temperatures, and then the
residual activity was assayed. For activity, the enzyme activity was assayed
at various temperatures by the standard assay method. B, effect of tem-
perature on stability (F) and activity (Œ) of purified xylose-isomerase. For
stability, the enzyme solution in K-phosphate buffer (100 mM, pH 7.0) was
incubated for 1 h at various temperatures, and then the residual activity was
assayed. For activity, the enzyme activity was assayed at various temper-
atures by the standard assay method.
Fig. 5. Pattern of hydrolysis of xylobiose and xylotriose by Streptomyces
sp. EC 10
-xylosidase. A, xylobiose; B, xylotriose. The xylodextrins were
incubated in the presence of
-xylosidase as indicated in Section 2. X,
xylose; X
2
, xylobiose; X
3
, xylotriose.
119
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
Ser-Tyr-Gln-Pro-Thr-Pro-Glu-Asp-Lys-Phe-Thr-Phe-
Gly Leu-Try-Thr-Val-Gly Try-Gln-Gly Arg-Asp-Pro-Phe-
Gly Asp-Ala-Thr-Arg-Gly Ala-Leu-Asp-Pro.
It is worthy of note that this is the only
-xylosidase
sequence determined in Streptomyces species. Moreover,
this sequence shows no homology with
-xylosidase from
other microorganisms, but the similarity is found toward
some xylose isomerase sequences. The Streptomyces sp. EC
10 amino acid sequence shows 91% identity with a xylose
isomerase produced by Streptomyces sp. SK strain, 80%
identity with a xylose isomerase from Actinoplanes missou-
riensis, 73% identity with a D-xylose ketol-isomerase from
T. thermophilus. Other similarities were found with Strep-
tomyces rubiginosus, Streptomyces diastaticus, Streptomy-
ces violaceoniger, and Arthrobacter sp. [39]. No
-xylosi-
dase activity was apparently investigated for these purified
xylose isomerase enzymes.
In Trichoderma reesei [40], Butyrivibrio fibrisolvens
[41] and Thermoanaerobacter ethanolicus [34] the purified
-xylosidase showed ␣-arabinofuranosidase activity and
both activities copurified strictly as shown here for
-xylo-
sidase-xylose isomerase. A molecular genetic study in Bac-
teroides ovatus [42] reported that
-xylosidase and ␣-ar-
abinofuranosidase were encoded by the same DNA region
within a cluster of genes involved in hemicellulose degra-
dation. A bifunctional xylanase-
-xylosidase has also been
cloned in Caldocellum saccharolyticum [43].
Our data conclude that at least in the Streptomyces genus,
-xylosidase and xylose isomerase are produced under the
form of a single bifunctional protein enzyme. It is plausible
to conclude that bifunctional enzymes are more common in
microbial hemicellulose degradation than previously ob-
served. This would be underlied by the fact that biomass
degrading enzymes act often in a synergy relationship.
Moreover,
the
Streptomyces
sp.
-xylosidase-xylose
isomerase could be used for producing xylulose, the first
metabolic intermediate in the xylose assimilatory pathway.
Acknowledgments
This work was supported by the EEC Non Nuclear En-
ergy, and by a personnal grant of the Belgian National Fund
for Scientific Research (FNRS) to M.P.N.B. was supported
by studentship from Marocco and the Van Buren fondation.
References
[1] Eriksson KE, Blanchette A, Ander M. Microbial and enzymatic
degradation of wood and wood components. Berlin: Springer Verlag,
1990. p. 181–213.
[2] Poutanen K. Characterization of xylanolytic enzymes for potential
applications. Diss Techn Res Centre 1988, Finland, Publication 47.
[3] Poutanen K, Ra¨tto¨ M, Puls J, Viikari L. Evaluation of different
microbial xylanolytic systems. J Biotechnol 1987;6:49 – 60.
[4] Dobberstein J, Emeis CC. Purification and characterization of
-
xylosidase from Aureobasidium pullulans. Appl Microbiol Biotech-
nol 1991;35:210 –5.
[5] Zhu H, Cheng KJ, Forsberg CW. A truncated
-xylosidase from the
anaerobic fungus Neocallimastix patriciarum 27. Can J Microbiol
1994;40:484 –90.
[6] Kersters–Hilderson H, Claeyssens M, Van Doorslaer E, Saman E, De
Bruyne CK.
-D-Xylosidase from Bacillus pumilus. Methods Enzy-
mol 1982;83:631–9.
[7] Lee SF, Forsberg C. W. Isolation and some properties of
-D-
xylosidase from Clostridium acetobutylicum ATCC 824. Appl Envi-
ron Microbiol 1987;53:651– 4.
[8] Saxena S, Fierobe HP, Gaudin C, Guerlesquin F, Belaich JP. Bio-
chemical properties of a
-xylosidase from Clostridium cellulolyti-
cum Appl Environ Microbiol 1995;61:3509 –12.
[9] Stutzenberger F, Bodine AB. Thermostable
-xylosidase from Ther-
momonospora curvata. J Industrial Microbiol Biotechnol 1998;20:
55– 60.
[10] Bachmann SL, McCarthy AJ. Purification and characterization of a
thermostable
-xylosidase from Thermomonospora fusca. J Gen Mi-
crobiol 1989;135:293–9.
[11] Jensen VJ, Rugh S. Industrial scale application of immobilized glu-
cose isomerase. Methods Enzymol 1987;136:356 –70.
[12] Lehmacher A, Bisswanger H. Isolation and characterization of an
extremely thermostable D-xylose isomerase from Thermus aquaticus
HB8. J General Microbiol 1990;136:679 – 86.
[13] Schellenberg GD, Sarthy A, Larson AE, Backer MP, Crabb JW,
Lidstrom M, Hall BD, Furlong CE. Xylose isomerase from Esche-
richia coli J Biol Chem 1984;259:6826 – 6832.
[14] Wihelm M, Hollenberg CP. Nucleotide sequence of the Bacillus
subtilis xylose isomerase gene: extensive homology between the
Bacillus and Escherichia coli enzyme. Nucleic Acids Res 1985;13:
5717–22.
[15] Dekker KA, Yamagata H, Sakaguchi K, Udaka S. Xylose (glucose)
isomerase gene from the thermophile Clostridium thermohydrosulfu-
ricom: cloning, sequencing, and expression in Escherichia coli Agric
Biol Chem 1991;55:221–7.
[16] Lee C, Meng M, Bagdasarian M, Zeikus JG. Catalytic mechanism of
xylose (glucose) isomerase from Clostridium thermosulfurogenes.
J Biol Chem 1990;265:19082–90.
Fig. 6. Cooperative enzyme action on oat spelt arabinoxylan.
-xylosidase
(F) and endoxylanase (E) were applicated individually and in combination
(‚). The theoretical additive effect is also shown (Œ).
120
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121
[17] Drocourt D, Bejar S, Calmels T, Reynes JP, Tiraby G. Nucleotide
sequence of the xylose isomerase gene from Streptomyces violaceoni-
ger. Nucleic Acids Res 1988;16:9337.
[18] Kikuchi T, Itoh Y, Kasumi T, Fukazawa C. Molecular cloning of the
xylA gene encoding xylose isomerase from Streptomyces griseofuscus
S-41. primary structure of the gene and its product. Agric Biol Chem
1990;54:2469 –72.
[19] Saari GC, Kumar AA, Kawasaki GH, Insley MY, O’Hara PJ. Se-
quence of the Ampullariella sp. strain 3876 gene coding for xylose
isomerase. J Bacteriol 1987;169:612– 8.
[20] Amore R, Hollenberg CP. Xylose isomerase from Actinoplanes mis-
souriensis: primary structure of the gene and protein. Nucleic Acids
Res 1989;17:7515.
[21] McCarthy AJ. Lignocellulose degrading actinomycetes. FEMS Mi-
crobiol Rev 1987;46:145– 63.
[22] Buchert J, Ranua M, Kantelinen A, Viikari L. The role of two
Trichoderma reesei xylanases in the bleaching of pure Kraft pulp.
Appl Microbiol Biotechnol 1992;37:825–9.
[23] Leduc C, Daneault C, Delaunois P, Jaspers C, Penninckx, M. Enzyme
pretreatment of kraft pulp to reduce consumption of bleach chemicals.
Appita 1995;48:435– 439.
[24] Woodward J. Xylanases functions, properties and applications. Top
Enzyme Ferment Biotechnol 1984;8:9 –30.
[25] Godden B, Penninckx M. Identification and evolution of the cellulo-
lytic microflora present during composting of cattle manure: on the
role of Actinomycetes sp. Ann Microbiol (Institut Pasteur-Paris) 1984;
135B:69 –78.
[26] Luhahi–Lumba F, Penninckx MJ. Characterization of the multiple
forms of
-xylanase produced by a Streptomyces sp. growing on
lignocellulose. Appl Microbiol Biotechnol 1992;36:733– 8.
[27] Godden B, Legon T, Helvenstein P, Penninckx M. Regulation of the
production of hemicellulolytic and cellulolytic enzymes by a Strep-
tomyces sp. growing on lignocellulose. J Gen Microbiol 1989;135:
285–92.
[28] Dische Z, Borenfreund E. A new spectrophotometric method for the
detection and determination of ketosugars and trioses. J Biol Chem
1951;192:583–7.
[29] Bradford M. A rapid and sensitive method for the quantification of
microgram quantities of protein using the principle of protein dye
binding. Anal Biochem 1976;72:248 –54.
[30] Miller GL. Use of dinitrosalicylic reagent for determination of reduc-
ing sugars. Anal Chem 1959;31:426 – 8.
[31] Bachmann SL, MacCarthy AJ. Purification and cooperative activity
of enzymes constituting the xylan-degrading system of Thermomono-
spora fusca. Appl Environ Microbiol 1991;57:2121–30.
[32] Erbeznik M, Dawson KA, Strobel HJ. Cloning and characterization of
transcription of the xylAB operon in Thermoanaerobacter ethanoli-
cus. J Bacteriol 1998;180:1103–9.
[33] Claeyssens M, Saman E, Kersters–Hilderson H, De Bruyne CK.
-D-Xylosidase from Bacillus pumilus: molecular properties and
oligomeric structure. Biochem Biophys Acta 1975;405:475– 81.
[34] Shao W, Wiegel J. Purification and characterization of a thermostable
-xylosidase from Thermoanaerobacter ethanolicus. J Bacteriol
1992;174:5848 –53.
[35] Matsuo M, Yasui T. B-Xylosidases of several fungi. In: Wood WA,
Kellog ST, editors. Methods in enzymology, part A: cellulose and
hemicellulose. Academic Press Inc (London), Ltd: 1988. p. 684 –95.
[36] Panbangred W, Kawaguchi O, Tomita T, Shinmyo A, Okada H.
Isolation of two
-xylosidase genes of Bacillus pumilus and compar-
ison of their gene products. Eur J Biochem 1984;138:267–73.
[37] Henrissat B, Driguez H, Viet C, Schulein M. Synergism of cellulases
from Trichoderma reesei in the degradation of cellulose. Biotechnol-
ogy 1985;3:722– 6.
[38] Biely P, Puls J, Schneider H. Acetyl xylan esterase in fungal cellu-
lolytic systems. FEBS Letters 1985;186:80 – 4.
[39] Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W,
Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs. Nucleic Acids Res 1997;25:3389 –
402.
[40] Poutanen K, Puls J. Characteristics of Thrichoderma reesei
-xylo-
sidase and its use in the hydrolysis of solubilized xylans. Appl
Microbiol Biotechnol 1988;28:425–32.
[41] Utt EA, Eddy CK, Keshav KF, Ingram LO. Sequencing and expres-
sion of the Butyrivibrio fibrisolvens xylB gene encoding a novel
bifunctional protein with
-D-xylosidase and ␣-L-arabinofuranosi-
dase activities. Appl Environ Microbiol 1991;57:1227–34.
[42] Whitehead TR, Hespell RB. The genes for three xylan-degrading
activities from Bacteroides ovatus are clustered in a 3.8-kilobase
region. J. Bacteriol 1990;172:2408 –12.
[43] Lu¨thi E, Love DR, McAnulty J, Wallace C, Caughey PA, Saul D,
Bergquist PL. Cloning, sequence analysis, and expression of genes
encoding xylan-degrading enzymes from the thermophile Caldocel-
lum saccharolyticum. Appl Environ Microbiol 1990;56:1017–24.
121
N. Belfaquih, M.J. Penninckx / Enzyme and Microbial Technology 27 (2000) 114 –121