1. DNA, RNA structure
2. DNA replication
3. Transcription, translation
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as Benjamin Cummings
•
DNA is a nucleic acid, made of long
chains of nucleotides
DNA and RNA are polymers of
nucleotides
Figure
10.2A
Nucleotide
Phosphate
group
Nitrogenou
s
base
Sugar
Polynucleotide
Sugar-phosphate backbone
DNA nucleotide
Phosphate
group
Nitrogenous base
(A, G, C, or T)
Thymine (T)
Sugar
(deoxyribose)
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DNA has four kinds of bases, A, T,
C, and G
Figure
10.2B
Pyrimidines
Thymine (T)
Cytosine (C)
Purines
Adenine (A)
Guanine (G)
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•
RNA is also a nucleic acid
–
different sugar
–
U instead of T
–
Single strand, usually
Figure
10.2C, D
Phosphate
group
Nitrogenous base
(A, G, C, or U)
Uracil (U)
Sugar
(ribose)
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•
James Watson and Francis Crick
worked out the three-dimensional
structure of DNA, based on work by
Rosalind Franklin
DNA is a double-stranded helix
Figure 10.3A, B
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Hydrogen bonds between bases hold
the strands together: A and T, C
and G
Figure
10.3D
Ribbon model
Partial chemical structure
Computer model
Hydrogen bond
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Untwisting and replication of DNA
•
each strand is a template for a new
strand
Figure
10.4B
helicase
DNA polymerase
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•
DNA replication begins at many
specific sites
How can entire chromosomes be replicated during S phase?
Figure
10.5A
Parental strand
Origin of replication
Bubble
Two daughter DNA molecules
Daughter strand
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Each strand of
the double helix
is oriented in
the opposite
direction
Figure
10.5B
5 end
3 end
3 end
5 end
P
P
P
P
P
P
P
P
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•
DNA
polymera
se works
in only
one
directio
n
5 end
P
P
Parental DNA
Figure
10.5C
DNA polymerase
molecule
5
3
3
5
3
5
Daughter strand
synthesized
continuously
Daughter
strand
synthesiz
ed
in pieces
DNA
ligase
Overall direction of replication
5
3
•
Telomere
sequence
s are
lost
with
each
replicat
ion.
•
Cancer,
aging
telomeres
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–
The DNA is transcribed into RNA,
which is translated into the
polypeptide
Figure
10.6A
DNA
RNA
Protein
TRANSCRIPTION
TRANSLATION
•
The information constituting an
organism’s genotype is carried in
its sequence of bases
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Transcription produces genetic
messages in the form of mRNA
Figure
10.9A
RNA
polymerase
RNA nucleotide
Direction of
transcription
Newly made RNA
Template
strand of DNA
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•
In
transcription,
DNA helix
unzips
–
RNA nucleotides
line up along
one strand of
DNA, following
the base-pairing
rules
–
single-stranded
messenger RNA
peels away and
DNA strands
rejoin
RNA polymerase
DNA of gene
Promoter
DNA
Terminator
DNA
Initiation
Elongation
Termination
Area shown
in Figure 10.9A
Growing
RNA
RNA
polymerase
Completed RNA
Figure
10.9B
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RNA transcripts of DNA
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•
Noncoding
segments,
introns,
are spliced
out
•
A cap and a
tail are
added to
the ends
Eukaryotic RNA is processed
before leaving the nucleus
Figure
10.10
DNA
RNA
transcript
with cap
and tail
mRNA
Exon Intron
Intron
Exon
Exon
Transcription
Addition of cap and tail
Introns removed
Exons spliced together
Coding sequence
NUCLEUS
CYTOPLASM
Tail
Cap
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The “words” of the DNA “language”
are triplets of bases called codons
–
The codons in a gene specify the
amino acid sequence of a polypeptide
Translation of nucleic acids
into amino acids
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Figure
10.7
DNA
molecule
Gene 1
Gene 2
Gene 3
DNA strand
TRANSCRIPTION
RNA
Polypeptide
TRANSLATION
Codon
Amino acid
U
C
A
G
U
C
A
G
G
A
C
U
G
A
C
U
G
A
C
U
G
A
C
U
U
U
U
U
U
C
U
U
A
U
U
G
C
U
U
C
U
C
C
U
A
C
U
G
A
U
U
A
U
C
A
U
A
A
U
G
G
U
U
G
U
C
G
U
A
G
U
G
phe
leu
leu
ile
met (start)
val
U
C
U
U
C
C
U
C
A
U
C
G
C
C
U
C
C
C
C
C
A
C
C
G
A
C
U
A
C
C
A
C
A
A
C
G
G
C
U
G
C
C
G
C
A
G
C
G
ser
pro
thr
ala
U
A
U
U
A
C
U
A
A
U
A
G
C
A
U
C
A
C
C
A
A
C
A
G
A
A
U
A
A
C
A
A
G
A
A
A
G
A
U
G
A
C
G
A
A
G
A
G
tyr
stop
stop
his
gln
asn
lys
asp
glu
U
G
U
U
G
C
U
G
A
U
G
G
C
G
U
C
G
C
C
G
A
C
G
G
A
G
U
A
G
C
A
G
A
A
G
G
G
G
U
G
G
C
G
G
A
G
G
G
cys
stop
trp
arg
ser
arg
gly
F
i
r
s
t
B
a
s
e
T
h
i
r
d
B
a
s
e
Second Base
Virtually all organisms share the
same genetic code “unity of life”
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An exercise in translating the
genetic code
Figure
10.8B
Start
codon
RNA
Transcribed strand
Stop
codon
Translation
Transcription
DNA
Polypeptide
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•
In the
cytoplasm, a
ribosome
attaches to
the mRNA and
translates its
message into a
polypeptide
•
The process is
aided by
transfer RNAs
Transfer RNA molecules serve as
interpreters during translation
Figure
10.11A
Hydrogen bond
Amino acid attachment site
RNA polynucleotide chain
Anticodon
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Each tRNA molecule has a triplet
anticodon on one end and an amino
acid attachment site on the other
Figure
10.11B, C
Anticodon
Amino acid
attachment
site
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Ribosomes build polypeptides
Figure 10.12A-C
Codons
tRNA
molecules
mRNA
Growing
polypeptide
Large
subunit
Small
subunit
mRNA
mRNA
binding
site
P site
A site
P
A
Growing
polypeptide
tRNA
Next amino acid
to be added to
polypeptide
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An initiation codon marks the
start of an mRNA message
Figure
10.13A
End
Start of genetic message
AUG = methionine
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•
mRNA, a specific tRNA, and the
ribosome subunits assemble during
initiation
Figure
10.13B
1
Initiator tRNA
mRNA
Start
codon
Small ribosomal
subunit
2
P site
Large
ribosomal
subunit
A site
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•
The mRNA moves a codon at a time
relative to the ribosome
–
A tRNA pairs with each codon,
adding an amino acid to the growing
polypeptide
–
A STOP codon causes the mRNA-
ribosome complex to fall apart
Elongation
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Figure 10.14
1
Codon recognition
Amino acid
Anticodon
A
sit
e
P
site
Polypeptide
2
Peptide bond
formation
3
Translocation
New
peptide
bond
mRNA
movement
mRNA
Stop
codon
b
a
Red object = ?
What molecules are
present in this
photo?
Table 14.2
Types of RNA
Type of RNA
Functions in
Function
Messenger RNA
(mRNA)
Nucleus,
migrates
to ribosomes
in cytoplasm
Carries DNA
sequence
information to
ribosomes
Transfer RNA
(tRNA)
Cytoplasm
Provides linkage
between mRNA
and amino acids;
transfers amino
acids to ribosomes
Ribosomal RNA
(rRNA)
Cytoplasm
Structural
component
of ribosomes
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The sequence of codons in DNA
spells out the primary structure of
a polypeptide
–
Polypeptides form proteins that
cells and organisms use
Review: The flow of genetic
information in the cell is
DNARNAprotein
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•
Mutations are changes in the DNA
base sequence
–
caused by errors in DNA replication
or by mutagens
–
change of a single DNA nucleotide
causes sickle-cell disease
Mutations can change the meaning of
genes
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Figure 10.16A
Normal hemoglobin DNA
mRNA
Normal hemoglobin
Glu
Mutant hemoglobin DNA
mRNA
Sickle-cell hemoglobin
Val
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•
Types of mutations
Figure
10.16B
mRNA
NORMAL GENE
BASE SUBSTITUTION
BASE DELETION
Protein
Met
Lys
Phe
Gly
Ala
Met
Lys
Phe
Ser
Ala
Met
Lys
Leu
Ala
His
Missing
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Figure 8.23A,
B
Deletion
Duplicati
on
Inversio
n
Homologous
chromosomes
Reciprocal
translocat
ion
Nonhomologous
chromosomes
•
Chromosomal changes can be large or small
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•
Summary of
transcript
ion and
translatio
n
Figure
10.15
1
Stage mRNA is
transcribed from a
DNA template.
Anticodon
DNA
mRNA
RNA
polymerase
TRANSLATION
Enzyme
Amino acid
tRNA
Initiator
tRNA
Large
ribosoma
l
subunit
Small
ribosoma
l
subunit
mRNA
Start
Codon
2
Stage Each
amino acid attaches
to its proper tRNA
with the help of a
specific enzyme and
ATP.
3
Stage
Initiation of
polypeptide
synthesis
The mRNA, the
first tRNA, and
the ribosomal
subunits come
together.
TRANSCRIPTION
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Figure 10.15
(continued)
4
Stage
Elongation
Growing
polypeptid
e
Codons
5
Stage
Termination
mRNA
New
peptid
e
bond
formin
g
Stop
Codon
The ribosome
recognizes a stop
codon. The poly-
peptide is terminated
and released.
A succession of
tRNAs add their
amino acids to the
polypeptide chain
as the mRNA is
moved through the
ribosome, one codon
at a time.
Polypeptide